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Description : not classified & original description: none
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dac_g41851 | |
| Cluster | HCCA: Cluster_40 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00172890 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00021p00161170 | ATL2, TL2,... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00025p00229930 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G35330 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT1G49210 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G35000 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G35910 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT2G42350 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G05200 | ATL6 | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G18773 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G11370 | RHA1A | RING-H2 finger A1A | 0.02 | OrthoFinder output from all 47 species | |
| AT4G15975 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G33565 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT4G38140 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G07040 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g107086 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g118032 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g15441 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g39979 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g01755 | ATL8 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g12490 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g18398 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g36684 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g48822 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g60107 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene30805.t1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene41078.t1 | Aspi01Gene41078 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene46827.t1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene46829.t1 | Aspi01Gene46829 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene46830.t1 | Aspi01Gene46830 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0093.g043291 | No alias | not classified & original description: CDS=1-675 | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g23395 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G057400.1 | Ceric.07G057400 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.07G057800.1 | ATL6, Ceric.07G057800 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G032300.1 | ATL6, Ceric.09G032300 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.09G083000.1 | Ceric.09G083000 | not classified & original description: pacid=50588443... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G083100.1 | Ceric.09G083100 | not classified & original description: pacid=50587896... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.09G083300.1 | Ceric.09G083300 | not classified & original description: pacid=50586861... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.09G083800.1 | Ceric.09G083800 | not classified & original description: pacid=50587862... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.18G057400.1 | RHA3A, Ceric.18G057400 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.18G057600.1 | Ceric.18G057600 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.18G058800.1 | Ceric.18G058800 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.22G061600.1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.22G069900.1 | Ceric.22G069900 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.25G065700.1 | Ceric.25G065700 | not classified & original description: pacid=50593844... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.26G043300.1 | Ceric.26G043300 | not classified & original description: pacid=50598941... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g48736 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g25304 | ATL43 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g16108 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01015682001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01032684001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_02533 | ATL2, TL2 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Gb_04301 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_05005 | BRH1 | E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_14312 | No alias | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g11520.1 | LOC_Os01g11520 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g55110.1 | LOC_Os01g55110 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g64620.1 | LOC_Os01g64620 | RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os02g49710.1 | LOC_Os02g49710 | IDF1 iron uptake IRT1-ubiquitin ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g49550.1 | RHA3A, LOC_Os04g49550 | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os08g06090.1 | RHA3B, LOC_Os08g06090 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g00972 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05453 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g12876 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g40549 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10021g0010 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| MA_223372g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_26001g0020 | ATL2, TL2 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| MA_2639751g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_308999g0010 | ATL2, TL2 | RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| MA_373963g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_80729g0030 | ATL2, TL2 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| MA_895676g0010 | No alias | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g12835 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g13489 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g20330 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g38764 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g00299 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g17181 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g30955 | XERICO | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g43979 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0020.g008065 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0116.g021081 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0146.g023101 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0190.g025249 | No alias | not classified & original description: CDS=1-534 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g03514 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo438800 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc03g083460.3.1 | Solyc03g083460 | RING-H2 finger protein ATL22 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g009780.1.1 | Solyc04g009780 | Putative RING-H2 finger protein ATL71 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc05g010170.2.1 | XERICO, Solyc05g010170 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g063110.3.1 | Solyc06g063110 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g064440.3.1 | Solyc06g064440 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Solyc10g081780.3.1 | Solyc10g081780 | Putative RING-H2 finger protein ATL71 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g005290.1.1 | Solyc11g005290 | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
| Solyc12g087840.1.1 | Solyc12g087840 | RING-H2-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g42318 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g53066 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g55760 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g36820 | ATL8 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g37222 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquiTin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e000398_P001 | Zm00001e000398 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e003264_P001 | Zm00001e003264 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e007129_P001 | Zm00001e007129 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e007956_P001 | ATRING1, RING1,... | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e017960_P001 | RHA3A, Zm00001e017960 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e018028_P001 | Zm00001e018028 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023238_P001 | Zm00001e023238 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023515_P001 | Zm00001e023515 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e030930_P001 | ATL3, Zm00001e030930 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e032838_P001 | Zm00001e032838 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e035560_P001 | ATL3, Zm00001e035560 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e041385_P001 | Zm00001e041385 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e041409_P001 | BRH1, Zm00001e041409 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
| BP | GO:0009725 | response to hormone | IEP | HCCA |
| BP | GO:0009733 | response to auxin | IEP | HCCA |
| BP | GO:0010033 | response to organic substance | IEP | HCCA |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
| BP | GO:0042221 | response to chemical | IEP | HCCA |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| MF | GO:0140359 | ABC-type transporter activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |