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Description : associated component *(AFR) of histone deacetylase machineries & original description: none
Gene families : OG0001072 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001072_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G75060 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.07G066600.1 | Ceric.07G066600 | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G085500.1 | Ceric.18G085500 | associated component *(AFR) of histone deacetylase... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g03490 | No alias | associated component *(AFR) of histone deacetylase... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01009650001 | No alias | Chromatin organisation.histone modifications.histone... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01019028001 | No alias | Chromatin organisation.histone modifications.histone... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01019388001 | No alias | Chromatin organisation.histone modifications.histone... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g08450.3 | LOC_Os04g08450 | associated component SAP30 of histone deacetylase machineries | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g21460.1 | LOC_Os10g21460 | associated component SAP30 of histone deacetylase machineries | 0.03 | OrthoFinder output from all 47 species | |
| Len_g14311 | No alias | associated component *(AFR) of histone deacetylase... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g18360 | No alias | associated component *(AFR) of histone deacetylase... | 0.03 | OrthoFinder output from all 47 species | |
| Mp7g07500.1 | No alias | associated component SAP30 of histone deacetylase machineries | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g00912 | No alias | associated component *(AFR) of histone deacetylase... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g079930.3.1 | Solyc04g079930 | associated component SAP30 of histone deacetylase machineries | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g081310.4.1 | Solyc08g081310 | associated component SAP30 of histone deacetylase machineries | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e027006_P001 | Zm00001e027006 | associated component SAP30 of histone deacetylase machineries | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006811 | monoatomic ion transport | IEP | HCCA |
| BP | GO:0006812 | monoatomic cation transport | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0015299 | obsolete solute:proton antiporter activity | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0055085 | transmembrane transport | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR025718 | SAP30_Sin3-bd | 200 | 245 |
| No external refs found! |