- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : RGA, RGA1
Description : transcription factor *(DELLA) & original description: none
Gene families : OG0001108 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001108_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aev_g02589 | |
| Cluster | HCCA: Cluster_3 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00016p00207840 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.GRAS... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G66350 | RGL1, RGL | RGA-like 1 | 0.07 | OrthoFinder output from all 47 species | |
| AT3G03450 | RGL2 | RGA-like 2 | 0.08 | OrthoFinder output from all 47 species | |
| Aob_g27908 | RGL1, RGL | GRAS-type transcription factor *(RAD1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene32212.t1 | RGL1, RGL,... | GRAS-type transcription factor *(RAD1) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene68508.t1 | RGA2, GAI,... | transcription factor *(DELLA) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0068.g036465 | RGA2, GAI | GRAS-type transcription factor & original description: CDS=1-2091 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0460.g072066 | RGA2, GAI | GRAS-type transcription factor & original description: CDS=1-2034 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g20248 | RGA, RGA1 | transcription factor *(DELLA) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01030735001 | RGL1, RGL | RNA biosynthesis.transcriptional activation.GRAS... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g49990.1 | RGA2, GAI, LOC_Os03g49990 | DELLA-type gibberellin signal transducer. transcription... | 0.02 | OrthoFinder output from all 47 species | |
| MA_1417572g0010 | RGA, RGA1 | transcription factor (GRAS) | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g31090 | RGA, RGA1 | transcription factor *(DELLA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g26688 | RGA, RGA1 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g27974 | RGL1, RGL | GRAS-type transcription factor *(RAD1) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g29234 | RGL1, RGL | GRAS-type transcription factor *(RAD1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g32765 | RGA, RGA1 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g33996 | RGL1, RGL | GRAS-type transcription factor *(RAD1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g44392 | RGA2, GAI | transcription factor *(DELLA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0075.g017422 | RGA2, GAI | GRAS-type transcription factor & original description: CDS=1-1875 | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g01866 | RGA2, GAI | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e005412_P001 | RGA, RGA1, Zm00001e005412 | DELLA-type gibberellin signal transducer. transcription... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| No external refs found! |