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Description : not classified & original description: none
Gene families : OG0001331 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001331_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aev_g02433 | |
| Cluster | HCCA: Cluster_68 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G40400 | No alias | Protein of unknown function (DUF399 and DUF3411) | 0.03 | OrthoFinder output from all 47 species | |
| AT5G12470 | No alias | Protein of unknown function (DUF3411) | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g048192 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g27483 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g27723 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g15861 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g23936 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Als_g34117 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Aob_g01529 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene06534.t1 | Aspi01Gene06534 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Azfi_s0055.g033944 | No alias | not classified & original description: CDS=18-2474 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g03217 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.22G078500.1 | Ceric.22G078500 | not classified & original description: pacid=50614469... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.29G029100.1 | Ceric.29G029100 | not classified & original description: pacid=50624979... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00021617.18 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g18040 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g22117 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g02819 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Dde_g06291 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ehy_g11697 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ehy_g22985 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01032197001 | No alias | Protein RETICULATA-RELATED 4, chloroplastic... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g61120.1 | LOC_Os01g61120 | Protein RETICULATA-RELATED 6, chloroplastic... | 0.07 | OrthoFinder output from all 47 species | |
| Len_g11651 | No alias | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Lfl_g35960 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_76219g0030 | No alias | Protein RETICULATA-RELATED 4, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
| Mp6g12840.1 | No alias | Protein RETICULATA-RELATED 6, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g12361 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g15648 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g02954 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g11767 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g20912 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Ore_g37256 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g20049 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g38821 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pnu_g07921 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g08153 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g57518 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0041.g012586 | No alias | not classified & original description: CDS=235-2685 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g08338 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g22685 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g35505 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo177305 | No alias | Protein RETICULATA-RELATED 5, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
| Smo71514 | No alias | Protein RETICULATA-RELATED 4, chloroplastic... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g087750.4.1 | Solyc01g087750 | Protein RETICULATA-RELATED 4, chloroplastic... | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g07578 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g22578 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g13626 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g19385 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e019415_P003 | Zm00001e019415 | Protein RETICULATA-RELATED 6, chloroplastic... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004176 | ATP-dependent peptidase activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006629 | lipid metabolic process | IEP | HCCA |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | HCCA |
| BP | GO:0006729 | tetrahydrobiopterin biosynthetic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008124 | 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | HCCA |
| BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0016730 | oxidoreductase activity, acting on iron-sulfur proteins as donors | IEP | HCCA |
| MF | GO:0016835 | carbon-oxygen lyase activity | IEP | HCCA |
| MF | GO:0016836 | hydro-lyase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0019751 | polyol metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0032977 | membrane insertase activity | IEP | HCCA |
| BP | GO:0034311 | diol metabolic process | IEP | HCCA |
| BP | GO:0034312 | diol biosynthetic process | IEP | HCCA |
| CC | GO:0034357 | photosynthetic membrane | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0042559 | pteridine-containing compound biosynthetic process | IEP | HCCA |
| CC | GO:0042651 | thylakoid membrane | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0046146 | tetrahydrobiopterin metabolic process | IEP | HCCA |
| BP | GO:0046165 | alcohol biosynthetic process | IEP | HCCA |
| BP | GO:0046173 | polyol biosynthetic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:0140104 | molecular carrier activity | IEP | HCCA |
| MF | GO:0140597 | protein carrier chaperone | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021825 | RETICULATA-related | 188 | 365 |
| No external refs found! |