Zm00001d017274 (GRMZM2G074604)


Aliases : GRMZM2G074604

Description : 16.2.1.1 secondary metabolism.phenylpropanoids.lignin biosynthesis.PAL Encodes PAL1, a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).


Gene families : OG_01_0000256 (Gene family) Phylogenetic Tree(s): OG0000256_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d017274
Cluster HCCA cluster: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01016257001 No alias 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.04 Gene family
GSVIVT01025214001 No alias 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.02 Gene family
GSVIVT01025703001 No alias No description available 0.13 Gene family
LOC_Os02g41650 Os02g0626400 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.06 Gene family
LOC_Os02g41670 Os02g0626600 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.04 Gene family
LOC_Os02g41680 Os02g0627100 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.02 Gene family
LOC_Os04g43760 Os04g0518100 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.08 Gene family
LOC_Os04g43800 Os04g0518400 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.03 Gene family
LOC_Os05g35290 Os05g0427400 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.04 Gene family
MA_123220g0010 No alias No description available 0.03 Gene family
MA_44561g0010 No alias 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.03 Gene family
Solyc05g056170.3.1 Solyc05g056170.3 No description available 0.04 Gene family
Solyc09g007910.3.1 Solyc09g007910.3 No description available 0.02 Gene family
Zm00001d033286 No alias 16.2.1.1 secondary metabolism.phenylpropanoids.lignin... 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 50 523
No external refs found!