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  5. Aev_g02200

Aev_g02200


Description : VPS23-interacting protein *(SH3P2) & original description: none


Gene families : OG0001132 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001132_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g02200

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0045.g029853 No alias not classified & original description: CDS=504-1643 0.01 OrthoFinder output from all 47 species
GSVIVT01021367001 No alias SH3 domain-containing protein 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01036934001 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder output from all 47 species
LOC_Os07g32460.1 LOC_Os07g32460 SH3 domain-containing protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os10g36870.1 LOC_Os10g36870 VPS23-interacting protein (SH3P2) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0097.g019424 No alias VPS23-interacting protein *(SH3P2) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0173.g024480 No alias not classified & original description: CDS=1-1200 0.03 OrthoFinder output from all 47 species
Zm00001e012552_P001 Zm00001e012552 VPS23-interacting protein (SH3P2) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032422 purine-rich negative regulatory element binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR001452 SH3_domain 324 372
No external refs found!