Dac_g31221


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g31221

Target Alias Description ECC score Gene Family Method Actions
AT2G03380 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G36980 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G05340 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g035621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42949 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16961 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17191 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g30899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04481 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05139 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07147 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18201 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19311 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05266 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27579 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11115 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g15693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g32926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g35712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g59647 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20467.t1 EMB2758, Aspi01Gene20467 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene43499.t1 REME1, Aspi01Gene43499 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43851.t1 Aspi01Gene43851 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene66060.t1 Aspi01Gene66060 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene72928.t1 Aspi01Gene72928 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023505 No alias not classified & original description: CDS=32-2620 0.02 OrthoFinder output from all 47 species
Azfi_s0049.g030697 No alias not classified & original description: CDS=1-2361 0.02 OrthoFinder output from all 47 species
Cba_g67760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08595 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08668 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08709 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16394 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g19078 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g26859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g33337 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g37168 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38687 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05444 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18566 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26486 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g28084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33253 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g37832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10721g0010 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_6329g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Msp_g03944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g35608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06923 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07585 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13340 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32640 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41022 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59327 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26490 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g02636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26065 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09800 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g23118 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e034478_P001 Zm00001e034478 Pentatricopeptide repeat-containing protein At3g24000,... 0.02 OrthoFinder output from all 47 species
Zm00001e039394_P003 Zm00001e039394 Pentatricopeptide repeat-containing protein At5g04780,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 432 462
IPR002885 Pentatricopeptide_repeat 232 262
IPR002885 Pentatricopeptide_repeat 201 230
IPR002885 Pentatricopeptide_repeat 404 424
IPR002885 Pentatricopeptide_repeat 129 177
IPR002885 Pentatricopeptide_repeat 328 374
No external refs found!