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  5. Dac_g28879

Dac_g28879 (MGP)


Aliases : MGP

Description : C2H2 subclass IDD transcription factor & original description: none


Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g28879

Target Alias Description ECC score Gene Family Method Actions
AT3G50700 IDD2, AtIDD2 indeterminate(ID)-domain 2 0.03 OrthoFinder output from all 47 species
AT5G03150 JKD C2H2-like zinc finger protein 0.04 OrthoFinder output from all 47 species
AT5G44160 NUC C2H2-like zinc finger protein 0.03 OrthoFinder output from all 47 species
GSVIVT01010283001 IDD5, AtIDD5 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
GSVIVT01035391001 AtIDD7, IDD7 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 OrthoFinder output from all 47 species
LOC_Os01g70870.1 IDD2, AtIDD2,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Msp_g07810 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g06563 MGP C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc06g072360.3.1 IDD14, AtIDD14,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Solyc11g069240.2.1 Solyc11g069240 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e003968_P002 IDD4, AtIDD4,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA

No InterPro domains available for this sequence

No external refs found!