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  5. Dac_g26969

Dac_g26969 (AT-GT2, GT2)


Aliases : AT-GT2, GT2

Description : not classified & original description: none


Gene families : OG0000670 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000670_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g26969
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Adi_g087396 AT-GTL1, GTL1, AT-GTL2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54991 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08768 AT-GT2, GT2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01649 AT-GT2, GT2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16747 AT-GT2, GT2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36070 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo409669 AT-GT2, GT2 No description available 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
CC GO:0032039 integrator complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 422 504
IPR044822 Myb_DNA-bind_4 160 242
No external refs found!