Dac_g26015 (AMY2, ATAMY2)

Aliases : AMY2, ATAMY2

Description : alpha amylase & original description: none

Gene families : OG0000515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000515_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dac_g26015

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene38425.t1	AMY2, ATAMY2,...	alpha amylase & original description: none	0.04	OrthoFinder output from all 47 species
LOC_Os01g25510.1	AMY1, ATAMY1,...	Alpha-amylase isozyme C OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
LOC_Os02g52710.1	AMY1, ATAMY1,...	alpha amylase	0.02	OrthoFinder output from all 47 species
LOC_Os09g28400.1	AMY1, ATAMY1,...	alpha amylase	0.03	OrthoFinder output from all 47 species
MA_9120657g0010	AMY2, ATAMY2	Probable alpha-amylase 2 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Ore_g02338	AMY2, ATAMY2	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g16056	No alias	alpha amylase & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g24472	No alias	alpha amylase & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e009946_P001	AMY1, ATAMY1,...	alpha amylase	0.03	OrthoFinder output from all 47 species
Zm00001e015947_P002	AMY1, ATAMY1,...	alpha amylase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004556	alpha-amylase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016160	amylase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0007165	signal transduction	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006047	Glyco_hydro_13_cat_dom	52	307
IPR012850	A-amylase_bs_C	362	417

External Links

No external refs found!