Dac_g23824 (HSP93-V, DCA1,...)

Aliases : HSP93-V, DCA1, ATHSP93-V, CLPC, CLPC1

Description : chaperone component *(ClpC) of chloroplast Clp-type protease complex & original description: none

Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dac_g23824

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00164160	HSP93-V, DCA1,...	External stimuli response.temperature.Hsp...	0.03	OrthoFinder output from all 47 species
Ala_g12182	CLPB3, CLPB-P, APG6	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g16086	HSP93-V, DCA1,...	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Als_g32977	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.03	OrthoFinder output from all 47 species
Aop_g08864	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.03	OrthoFinder output from all 47 species
Ceric.30G013400.1	SAG15, CLPD,...	chaperone component *(ClpD) of chloroplast Clp-type...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021365.4	ATHSP101, HOT1, HSP101	Chaperone protein ClpB1 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Cre02.g143307	No alias	No description available	0.02	OrthoFinder output from all 47 species
Dde_g24879	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.04	OrthoFinder output from all 47 species
LOC_Os04g32560.1	HSP93-V, DCA1,...	chaperone component ClpC of chloroplast Clp-type protease complex	0.03	OrthoFinder output from all 47 species
LOC_Os12g12850.1	HSP93-V, DCA1,...	chaperone component ClpC of chloroplast Clp-type protease complex	0.02	OrthoFinder output from all 47 species
Len_g14887	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.02	OrthoFinder output from all 47 species
MA_596288g0010	HSP93-V, DCA1,...	Chaperone protein ClpC1, chloroplastic OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
MA_8117g0010	HSP93-V, DCA1,...	ATP-dependent Clp protease ATP-binding subunit ClpA...	0.03	OrthoFinder output from all 47 species
Nbi_g10414	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.03	OrthoFinder output from all 47 species
Pnu_g10514	HSP93-V, DCA1,...	chaperone component *(ClpC) of chloroplast Clp-type...	0.03	OrthoFinder output from all 47 species
Sam_g19448	No alias	organellar chaperone *(Clp-p/Clp-m) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g36359	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc12g042060.3.1	HSP93-V, DCA1,...	chaperone component ClpC of chloroplast Clp-type protease complex	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003747	translation release factor activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006415	translational termination	IEP	HCCA
MF	GO:0008079	translation termination factor activity	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
BP	GO:0022411	cellular component disassembly	IEP	HCCA
BP	GO:0032984	protein-containing complex disassembly	IEP	HCCA
MF	GO:0043021	ribonucleoprotein complex binding	IEP	HCCA
MF	GO:0043022	ribosome binding	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR019489	Clp_ATPase_C	809	888
IPR004176	Clp_R_dom	176	227
IPR004176	Clp_R_dom	100	152
IPR003959	ATPase_AAA_core	628	803
IPR041546	ClpA/ClpB_AAA_lid	429	530
IPR003959	ATPase_AAA_core	291	420

External Links

No external refs found!

Dac_g23824 (HSP93-V, DCA1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation