1. Home
  2. Species
  3. Diplazium proliferum (Lam.) Kaulf.
  4. Sequence
  5. Dac_g23641

Dac_g23641


Description : regulatory RNA helicase *(RH27/RH51) of miRNA biogenesis pathway & original description: none


Gene families : OG0005389 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005389_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g23641

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00225030 evm_27.TU.AmTr_v1... DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Aop_g12658 No alias regulatory RNA helicase *(RH27/RH51) of miRNA biogenesis... 0.04 OrthoFinder output from all 47 species
Cre07.g314900 No alias DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Ehy_g09142 No alias regulatory RNA helicase *(RH27/RH51) of miRNA biogenesis... 0.03 OrthoFinder output from all 47 species
LOC_Os03g58810.1 LOC_Os03g58810 DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_109969g0010 No alias DEAD-box ATP-dependent RNA helicase 51 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp7g12890.1 No alias DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Ore_g04508 No alias regulatory RNA helicase *(RH27/RH51) of miRNA biogenesis... 0.02 OrthoFinder output from all 47 species
Smo104808 No alias DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Smo230685 No alias DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Zm00001e011842_P001 Zm00001e011842 DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
BP GO:0110154 RNA decapping IEP HCCA
BP GO:0110156 methylguanosine-cap decapping IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 199 370
IPR001650 Helicase_C 412 515
IPR025313 DUF4217 557 617
No external refs found!