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  5. Dac_g22218

Dac_g22218


Description : not classified & original description: none


Gene families : OG0004324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004324_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g22218

Target Alias Description ECC score Gene Family Method Actions
Cre01.g013800 No alias No description available 0.02 OrthoFinder output from all 47 species
MA_101073g0010 No alias Cold shock protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Sam_g24965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024430_P001 Zm00001e024430 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006751 glutathione catabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016842 amidine-lyase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0042219 cellular modified amino acid catabolic process IEP HCCA
BP GO:0043171 peptide catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044273 sulfur compound catabolic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 216 232
IPR001878 Znf_CCHC 297 308
IPR001878 Znf_CCHC 176 191
IPR001878 Znf_CCHC 327 343
No external refs found!