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  5. Dac_g21380

Dac_g21380


Description : component *(uS3) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001769 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001769_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g21380

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00157370 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
AT5G35530 No alias Ribosomal protein S3 family protein 0.04 OrthoFinder output from all 47 species
Ala_g20217 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Als_g06986 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Als_g19714 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Aop_g10053 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021462.41 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
Cre02.g102250 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
Dde_g20443 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ehy_g13853 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01015110001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Gb_13623 No alias component RPS3 of SSU proteome 0.02 OrthoFinder output from all 47 species
LOC_Os03g38000.1 LOC_Os03g38000 component RPS3 of SSU proteome 0.03 OrthoFinder output from all 47 species
Mp1g16730.1 No alias component RPS3 of SSU proteome 0.03 OrthoFinder output from all 47 species
Msp_g00955 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pir_g11610 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Pp3c11_22640V3.1 Pp3c11_22640 Ribosomal protein S3 family protein 0.03 OrthoFinder output from all 47 species
Pp3c15_21360V3.1 Pp3c15_21360 Ribosomal protein S3 family protein 0.03 OrthoFinder output from all 47 species
Pp3c16_3760V3.1 Pp3c16_3760 Ribosomal protein S3 family protein 0.02 OrthoFinder output from all 47 species
Pp3c7_2620V3.1 Pp3c7_2620 Ribosomal protein S3 family protein 0.02 OrthoFinder output from all 47 species
Pp3c9_12170V3.1 Pp3c9_12170 Ribosomal protein S3 family protein 0.04 OrthoFinder output from all 47 species
Sam_g27040 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g27041 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Solyc07g041310.3.1 Solyc07g041310 component RPS3 of SSU proteome 0.03 OrthoFinder output from all 47 species
Solyc08g061843.1.1 Solyc08g061843 component RPS3 of SSU proteome 0.04 OrthoFinder output from all 47 species
Spa_g10670 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Spa_g10672 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Spa_g30478 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Spa_g54393 No alias component *(uS3) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e021687_P001 Zm00001e021687 component RPS3 of SSU proteome 0.04 OrthoFinder output from all 47 species
Zm00001e040177_P002 Zm00001e040177 component RPS3 of SSU proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004044 KH_dom_type_2 21 94
IPR001351 Ribosomal_S3_C 107 189
No external refs found!