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  5. Dac_g21372

Dac_g21372 (PGA2, APG2, TATC, UNE3)


Aliases : PGA2, APG2, TATC, UNE3

Description : component *(cpTatC) of thylakoid membrane Tat translocation system & original description: none


Gene families : OG0005203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g21372
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Ala_g08390 PGA2, APG2, TATC, UNE3 component *(cpTatC) of thylakoid membrane Tat... 0.03 OrthoFinder output from all 47 species
Aop_g31501 PGA2, APG2, TATC, UNE3 component *(cpTatC) of thylakoid membrane Tat... 0.04 OrthoFinder output from all 47 species
GSVIVT01011805001 PGA2, APG2, TATC, UNE3 Protein translocation.chloroplast.thylakoid membrane Tat... 0.02 OrthoFinder output from all 47 species
LOC_Os01g31680.1 PGA2, APG2,... component cpTatC of thylakoid membrane Tat translocation system 0.02 OrthoFinder output from all 47 species
Nbi_g01842 PGA2, APG2, TATC, UNE3 component *(cpTatC) of thylakoid membrane Tat... 0.03 OrthoFinder output from all 47 species
Spa_g18248 PGA2, APG2, TATC, UNE3 component *(cpTatC) of thylakoid membrane Tat... 0.04 OrthoFinder output from all 47 species
Zm00001e000897_P002 PGA2, APG2,... component cpTatC of thylakoid membrane Tat translocation system 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002033 TatC 160 368
No external refs found!