1. Home
  2. Species
  3. Diplazium proliferum (Lam.) Kaulf.
  4. Sequence
  5. Dac_g20945

Dac_g20945 (TGH)


Aliases : TGH

Description : component *(TOUGH) of DCL1-HYL1 miRNA biogenesis complex & original description: none


Gene families : OG0004570 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004570_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g20945

Target Alias Description ECC score Gene Family Method Actions
AT5G23080 TGH SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 0.02 OrthoFinder output from all 47 species
Adi_g112661 TGH component *(TOUGH) of DCL1-HYL1 miRNA biogenesis complex... 0.03 OrthoFinder output from all 47 species
Ala_g12092 TGH component *(TOUGH) of DCL1-HYL1 miRNA biogenesis complex... 0.03 OrthoFinder output from all 47 species
Ceric.03G041500.1 TGH, Ceric.03G041500 component *(TOUGH) of DCL1-HYL1 miRNA biogenesis complex... 0.03 OrthoFinder output from all 47 species
Dcu_g15206 TGH component *(TOUGH) of DCL1-HYL1 miRNA biogenesis complex... 0.04 OrthoFinder output from all 47 species
Lfl_g10031 TGH component *(TOUGH) of DCL1-HYL1 miRNA biogenesis complex... 0.03 OrthoFinder output from all 47 species
Mp1g06200.1 TGH component TOUGH of DCL1-HYL1 miRNA biogenesis complex 0.05 OrthoFinder output from all 47 species
Ore_g44868 TGH component *(TOUGH) of DCL1-HYL1 miRNA biogenesis complex... 0.03 OrthoFinder output from all 47 species
Spa_g12253 TGH component *(TOUGH) of DCL1-HYL1 miRNA biogenesis complex... 0.04 OrthoFinder output from all 47 species
Tin_g11519 TGH component *(TOUGH) of DCL1-HYL1 miRNA biogenesis complex... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006397 mRNA processing IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140612 DNA damage sensor activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140664 ATP-dependent DNA damage sensor activity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR000061 Surp 406 455
IPR011666 DUF1604 41 120
No external refs found!