Dac_g20861 (RSH3, AT-RSH3, ATRSH3)


Aliases : RSH3, AT-RSH3, ATRSH3

Description : bifunctional ppGpp synthetase and hydrolase *(RSH) & original description: none


Gene families : OG0001778 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001778_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g20861

Target Alias Description ECC score Gene Family Method Actions
AT3G14050 AT-RSH2, ATRSH2, RSH2 RELA/SPOT homolog 2 0.03 OrthoFinder output from all 47 species
Ala_g03720 RSH3, AT-RSH3, ATRSH3 bifunctional ppGpp synthetase and hydrolase *(RSH) &... 0.04 OrthoFinder output from all 47 species
Als_g04435 AT-RSH2, ATRSH2, RSH2 bifunctional ppGpp synthetase and hydrolase *(RSH) &... 0.03 OrthoFinder output from all 47 species
Azfi_s1463.g103412 AT-RSH2, ATRSH2, RSH2 bifunctional ppGpp synthetase and hydrolase *(RSH) &... 0.04 OrthoFinder output from all 47 species
Ceric.12G079500.1 AT-RSH2, ATRSH2,... bifunctional ppGpp synthetase and hydrolase *(RSH) &... 0.03 OrthoFinder output from all 47 species
LOC_Os07g42160.1 RSH3, AT-RSH3,... Probable GTP diphosphokinase RSH3, chloroplastic... 0.02 OrthoFinder output from all 47 species
Ore_g38694 AT-RSH2, ATRSH2, RSH2 bifunctional ppGpp synthetase and hydrolase *(RSH) &... 0.02 OrthoFinder output from all 47 species
Spa_g08599 RSH3, AT-RSH3, ATRSH3 bifunctional ppGpp synthetase and hydrolase *(RSH) &... 0.03 OrthoFinder output from all 47 species
Zm00001e034279_P001 RSH3, AT-RSH3,... Probable GTP diphosphokinase RSH3, chloroplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015969 guanosine tetraphosphate metabolic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007685 RelA_SpoT 442 552
No external refs found!