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  5. Dac_g18041

Dac_g18041 (AMY3, ATAMY3)


Aliases : AMY3, ATAMY3

Description : alpha amylase & original description: none


Gene families : OG0000515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000515_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g18041
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Cre08.g362450 AMY2, ATAMY2 Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
Gb_30449 AMY1, ATAMY1 alpha amylase 0.02 OrthoFinder output from all 47 species
Lfl_g24732 AMY1, ATAMY1 alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426497g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8527195g0010 AMY3, ATAMY3 Alpha-amylase 3, chloroplastic OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR006047 Glyco_hydro_13_cat_dom 621 902
IPR012850 A-amylase_bs_C 923 985
No external refs found!