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  5. Dac_g17145

Dac_g17145 (RPS17, CS17, PRPS17)


Aliases : RPS17, CS17, PRPS17

Description : component *(uS17c) of small plastid ribosomal-subunit proteome & original description: none


Gene families : OG0002325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002325_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g17145
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AT1G79850 RPS17, CS17, PRPS17 ribosomal protein S17 0.02 OrthoFinder output from all 47 species
Adi_g012725 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Adi_g012726 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ala_g13255 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Als_g47206 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Aop_g43549 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Azfi_s0430.g069336 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.11G069100.1 Ceric.11G069100 component *(uS17c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Dde_g25473 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Gb_07769 RPS17, CS17, PRPS17 component psRPS17 of small ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
Lfl_g10801 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Mp5g05080.1 RPS17, CS17, PRPS17 component psRPS17 of small ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Msp_g12962 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.13 OrthoFinder output from all 47 species
Nbi_g24135 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Ore_g06145 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pp3c11_14630V3.1 RPS17, CS17,... ribosomal protein S17 0.04 OrthoFinder output from all 47 species
Pp3c1_12860V3.1 RPS17, CS17,... ribosomal protein S17 0.01 OrthoFinder output from all 47 species
Sam_g47246 No alias component *(uS17c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Solyc03g120630.4.1 RPS17, CS17,... component psRPS17 of small ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
Spa_g48114 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Tin_g09281 RPS17, CS17, PRPS17 component *(uS17c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Zm00001e028738_P001 RPS17, CS17,... component psRPS17 of small ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR000266 Ribosomal_S17/S11 72 139
No external refs found!