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  5. Dac_g15058

Dac_g15058


Description : REM-type transcription factor & original description: none


Gene families : OG0000663 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000663_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g15058

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00272200 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.04 OrthoFinder output from all 47 species
AT3G19184 No alias AP2/B3-like transcriptional factor family protein 0.04 OrthoFinder output from all 47 species
AT5G58280 No alias AP2/B3-like transcriptional factor family protein 0.04 OrthoFinder output from all 47 species
Adi_g075571 No alias REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g28493 No alias REM-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Als_g15351 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51859 No alias REM-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g23618 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06897 No alias REM-type transcription factor & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g25439 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g36068 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene04981.t1 Aspi01Gene04981 REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene24779.t1 Aspi01Gene24779 REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene24780.t1 Aspi01Gene24780 REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene61918.t1 Aspi01Gene61918 REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0402.g068312 No alias REM-type transcription factor & original description: CDS=62-2368 0.03 OrthoFinder output from all 47 species
Ceric.02G084400.1 Ceric.02G084400 REM-type transcription factor & original description:... 0.06 OrthoFinder output from all 47 species
Dcu_g18248 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g41437 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43688 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01007552001 No alias B3 domain-containing protein Os01g0905400 OS=Oryza... 0.01 OrthoFinder output from all 47 species
GSVIVT01009519001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 OrthoFinder output from all 47 species
GSVIVT01031848001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g67830.1 LOC_Os01g67830 B3 domain-containing protein Os01g0905400 OS=Oryza... 0.02 OrthoFinder output from all 47 species
LOC_Os03g08620.1 LOC_Os03g08620 transcription factor (REM) 0.05 OrthoFinder output from all 47 species
Len_g01795 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g30139 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g55690 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Len_g56640 No alias REM-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g28691 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g29370 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
MA_10433064g0010 No alias transcription factor (REM) 0.03 OrthoFinder output from all 47 species
MA_125845g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_430451g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp2g08790.1 No alias transcription factor (REM) 0.03 OrthoFinder output from all 47 species
Msp_g09553 No alias REM-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g36795 No alias REM-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g08674 No alias REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g34487 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g28568 No alias REM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g43844 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01929 No alias REM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11582 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11583 No alias REM-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g14471 No alias REM-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004736 No alias REM-type transcription factor & original description: CDS=35-988 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018379 No alias REM-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Sam_g14184 No alias REM-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g48173 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Smo424732 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 OrthoFinder output from all 47 species
Solyc04g079130.2.1 Solyc04g079130 transcription factor (REM) 0.05 OrthoFinder output from all 47 species
Solyc06g007530.2.1 Solyc06g007530 transcription factor (REM) 0.02 OrthoFinder output from all 47 species
Solyc06g034140.3.1 Solyc06g034140 transcription factor (REM) 0.04 OrthoFinder output from all 47 species
Solyc10g053890.2.1 Solyc10g053890 B3 domain-containing protein Os01g0905400 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Spa_g03459 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49592 No alias REM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g56976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00720 No alias REM-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g11017 No alias REM-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g29854 No alias REM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018925_P002 Zm00001e018925 B3 domain-containing protein Os01g0905400 OS=Oryza... 0.01 OrthoFinder output from all 47 species
Zm00001e020584_P001 Zm00001e020584 transcription factor (REM) 0.03 OrthoFinder output from all 47 species
Zm00001e040028_P004 Zm00001e040028 transcription factor (REM) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 138 227
No external refs found!