Dac_g14500

Description : component *(eL22) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0000996 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000996_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dac_g14500

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00069p00189250	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
AT3G05560	No alias	Ribosomal L22e protein family	0.08	OrthoFinder output from all 47 species
AT5G27770	No alias	Ribosomal L22e protein family	0.08	OrthoFinder output from all 47 species
Adi_g012188	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ala_g18322	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Als_g03478	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Als_g38436	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aob_g00408	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g10541	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aop_g22540	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Azfi_s0003.g007793	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Azfi_s0005.g009357	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Ceric.08G045600.1	Ceric.08G045600	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ceric.26G014800.1	Ceric.26G014800	component *(eL22) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001206.7	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.03	OrthoFinder output from all 47 species
Cre07.g357850	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.05	OrthoFinder output from all 47 species
Dac_g04863	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dcu_g18517	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
GSVIVT01028021001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
GSVIVT01031130001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.05	OrthoFinder output from all 47 species
GSVIVT01031158001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
GSVIVT01035141001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.06	OrthoFinder output from all 47 species
Gb_08874	No alias	component RPL22 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Gb_36164	No alias	component RPL22 of LSU proteome component	0.04	OrthoFinder output from all 47 species
LOC_Os03g22340.1	LOC_Os03g22340	component RPL22 of LSU proteome component	0.06	OrthoFinder output from all 47 species
LOC_Os07g47710.1	LOC_Os07g47710	component RPL22 of LSU proteome component	0.03	OrthoFinder output from all 47 species
MA_130453g0010	No alias	component RPL22 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Mp4g02920.1	No alias	component RPL22 of LSU proteome component	0.06	OrthoFinder output from all 47 species
Msp_g03306	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Msp_g20028	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Pp3c11_630V3.1	Pp3c11_630	Ribosomal L22e protein family	0.03	OrthoFinder output from all 47 species
Pp3c1_120V3.1	Pp3c1_120	Ribosomal L22e protein family	0.03	OrthoFinder output from all 47 species
Pp3c2_28500V3.1	Pp3c2_28500	Ribosomal L22e protein family	0.04	OrthoFinder output from all 47 species
Pp3c2_28510V3.1	Pp3c2_28510	Ribosomal L22e protein family	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0197.g025519	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g13724	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Sam_g30822	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Solyc01g099830.3.1	Solyc01g099830	component RPL22 of LSU proteome component	0.05	OrthoFinder output from all 47 species
Solyc09g075150.3.1	Solyc09g075150	component RPL22 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Solyc09g075155.1.1	Solyc09g075155	component RPL22 of LSU proteome component	0.03	OrthoFinder output from all 47 species
Spa_g22846	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Spa_g25050	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Tin_g36488	No alias	component *(eL22) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Zm00001e010958_P001	Zm00001e010958	component RPL22 of LSU proteome component	0.02	OrthoFinder output from all 47 species
Zm00001e035835_P001	Zm00001e035835	component RPL22 of LSU proteome component	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006400	tRNA modification	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016763	pentosyltransferase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
CC	GO:0035145	exon-exon junction complex	IEP	HCCA
BP	GO:0042254	ribosome biogenesis	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
MF	GO:0140658	ATP-dependent chromatin remodeler activity	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002671	Ribosomal_L22e	19	128

External Links

No external refs found!

Dac_g14500

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation