- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : RACK1C_AT
Description : component *(RACK1) of small ribosomal-subunit (SSU) proteome & original description: none
Gene families : OG0002231 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002231_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00105p00058690 | RACK1B_AT,... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.05 | OrthoFinder output from all 47 species | |
| AT1G48630 | RACK1B_AT | receptor for activated C kinase 1B | 0.08 | OrthoFinder output from all 47 species | |
| AT3G18130 | RACK1C_AT | receptor for activated C kinase 1C | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g12720 | RACK1C_AT | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g08943 | RACK1C_AT | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g00477 | RACK1C_AT | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g06871 | RACK1C_AT | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0113.g045894 | RACK1C_AT | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0230.g059177 | RACK1B_AT | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.02G088700.1 | RACK1C_AT,... | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000169.6 | RACK1C_AT | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000254.89 | TOZ | Dynein assembly factor with WDR repeat domains 1... | 0.01 | OrthoFinder output from all 47 species | |
| Cre06.g278222 | RACK1C_AT | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01008395001 | MYB4R1, AtMYB4R1 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g49290.1 | RACK1C_AT, LOC_Os01g49290 | associated component RACK1 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g47890.1 | RACK1C_AT, LOC_Os05g47890 | associated component RACK1 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| MA_10435947g0010 | RACK1B_AT | Guanine nucleotide-binding protein subunit beta-like... | 0.04 | OrthoFinder output from all 47 species | |
| Mp3g15630.1 | RACK1C_AT | associated component RACK1 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g08733 | RACK1C_AT | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g06103 | RACK1C_AT | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g46221 | RACK1C_AT | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g19034 | No alias | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g19035 | No alias | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Smo266532 | RACK1C_AT | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g119040.3.1 | RACK1B_AT, Solyc03g119040 | associated component RACK1 of SSU proteome | 0.06 | OrthoFinder output from all 47 species | |
| Solyc06g069010.3.1 | RACK1B_AT, Solyc06g069010 | associated component RACK1 of SSU proteome | 0.06 | OrthoFinder output from all 47 species | |
| Solyc12g040510.2.1 | RACK1B_AT, Solyc12g040510 | associated component RACK1 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g01709 | RACK1C_AT | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g16013 | RACK1C_AT | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g25398 | RACK1C_AT | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g25399 | RACK1C_AT | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g04974 | RACK1C_AT | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g45000 | RACK1C_AT | component *(RACK1) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e026456_P001 | RACK1C_AT, Zm00001e026456 | associated component RACK1 of SSU proteome | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e032340_P001 | RACK1C_AT, Zm00001e032340 | associated component RACK1 of SSU proteome | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006400 | tRNA modification | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0016763 | pentosyltransferase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| No external refs found! |