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  5. Dac_g13538

Dac_g13538 (UBC24, PHO2, ATUBC24)


Aliases : UBC24, PHO2, ATUBC24

Description : not classified & original description: none


Gene families : OG0001231 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001231_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g13538
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Adi_g102778 PFU2, UBC23 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35966.t1 PFU2, UBC23,... E2 ubiquitin-conjugating protein *(PHO2) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g03204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19557 PFU2, UBC23 E2 ubiquitin-conjugating protein *(PHO2) & original... 0.03 OrthoFinder output from all 47 species
Ore_g43040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 15 67
IPR000608 UBQ-conjugat_E2 614 740
No external refs found!