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  5. Dac_g13359

Dac_g13359 (ARP)


Aliases : ARP

Description : EC_4.2 carbon-oxygen lyase & original description: none


Gene families : OG0005265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005265_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g13359
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Ala_g04198 ARP EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11622 ARP EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G068700.1 ARP, Ceric.25G068700 EC_4.2 carbon-oxygen lyase & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000241.113 ARP DNA damage response.DNA repair mechanisms.base excision... 0.02 OrthoFinder output from all 47 species
Len_g19063 ARP EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g016530.3.1 ARP, Solyc04g016530 AP-endonuclease (ARP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005135 Endo/exonuclease/phosphatase 331 584
No external refs found!