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  5. Dac_g13347

Dac_g13347


Description : component *(SWIB) of SWI-B chromatin-remodeling complexes & original description: none


Gene families : OG0001482 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001482_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g13347

Target Alias Description ECC score Gene Family Method Actions
AT4G34290 No alias SWIB/MDM2 domain superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g017892 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g30985 No alias component *(SWIB) of SWI-B chromatin-remodeling... 0.03 OrthoFinder output from all 47 species
Aop_g42634 No alias component *(SWIB) of SWI-B chromatin-remodeling... 0.03 OrthoFinder output from all 47 species
Ehy_g04288 No alias component *(SWIB) of SWI-B chromatin-remodeling... 0.03 OrthoFinder output from all 47 species
Gb_09375 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g55310.1 LOC_Os03g55310 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g32280.1 LOC_Os12g32280 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc01g107330.4.1 Solyc01g107330 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g12782 No alias component *(SWIB) of SWI-B chromatin-remodeling... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR003121 SWIB_MDM2_domain 73 145
No external refs found!