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Aliases : CYCA1;1
Description : not classified & original description: none
Gene families : OG0001097 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001097_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dac_g13212 | |
| Cluster | HCCA: Cluster_18 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00272790 | CYCA3;1,... | Cell cycle.regulation.cyclins.CYCA-type cyclin | 0.12 | OrthoFinder output from all 47 species | |
| AMTR_s00048p00184670 | CYCA2;4,... | Cell cycle.regulation.cyclins.CYCA-type cyclin | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00068p00198800 | CYCA1;1 | Cell cycle.regulation.cyclins.CYCA-type cyclin | 0.12 | OrthoFinder output from all 47 species | |
| AT1G15570 | CYCA2;3 | CYCLIN A2;3 | 0.02 | OrthoFinder output from all 47 species | |
| AT1G44110 | CYCA1;1 | Cyclin A1;1 | 0.09 | OrthoFinder output from all 47 species | |
| AT1G47210 | CYCA3;2 | cyclin-dependent protein kinase 3;2 | 0.04 | OrthoFinder output from all 47 species | |
| AT1G80370 | CYCA2;4 | Cyclin A2;4 | 0.04 | OrthoFinder output from all 47 species | |
| AT5G43080 | CYCA3;1 | Cyclin A3;1 | 0.07 | OrthoFinder output from all 47 species | |
| Adi_g023459 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g039314 | CYCA2;1 | not classified & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Ala_g21059 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.14 | OrthoFinder output from all 47 species | |
| Ala_g23638 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g25625 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.13 | OrthoFinder output from all 47 species | |
| Als_g03751 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g14283 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.09 | OrthoFinder output from all 47 species | |
| Aob_g29454 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g01772 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.17 | OrthoFinder output from all 47 species | |
| Aop_g04287 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.07 | OrthoFinder output from all 47 species | |
| Aop_g19060 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.15 | OrthoFinder output from all 47 species | |
| Aspi01Gene15105.t1 | CYCA1;1, Aspi01Gene15105 | regulatory protein *(TAM) involved in metaphase to... | 0.08 | OrthoFinder output from all 47 species | |
| Aspi01Gene18499.t1 | CYCA1;1, Aspi01Gene18499 | regulatory protein *(TAM) involved in metaphase to... | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0006.g010440 | CYCA1;1 | not classified & original description: CDS=585-2150 | 0.09 | OrthoFinder output from all 47 species | |
| Azfi_s0051.g031411 | CYCA1;1 | not classified & original description: CDS=319-1644 | 0.06 | OrthoFinder output from all 47 species | |
| Azfi_s0127.g048725 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.08G046900.1 | CYCA1;1, Ceric.08G046900 | regulatory protein *(TAM) involved in metaphase to... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.26G030100.1 | CYCA1;1, Ceric.26G030100 | regulatory protein *(TAM) involved in metaphase to... | 0.16 | OrthoFinder output from all 47 species | |
| Ceric.30G011000.1 | CYCA1;1, Ceric.30G011000 | regulatory protein *(TAM) involved in metaphase to... | 0.17 | OrthoFinder output from all 47 species | |
| Ceric.33G050700.1 | CYCA1;1, Ceric.33G050700 | regulatory protein *(TAM) involved in metaphase to... | 0.14 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000076.67 | CYCA1;1 | Cyclin-A2-1 OS=Oryza sativa subsp. japonica | 0.07 | OrthoFinder output from all 47 species | |
| Cre03.g207900 | CYCA1;1 | Cell cycle.regulation.cyclins.CYCA-type cyclin | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g04793 | CYC3B, CYCA2;2, CYC2BAT | regulatory protein *(TAM) involved in metaphase to... | 0.15 | OrthoFinder output from all 47 species | |
| Dcu_g31687 | CYCA1;1 | regulatory protein *(CYCA) of cell cycle & original... | 0.17 | OrthoFinder output from all 47 species | |
| Dde_g11191 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01008823001 | CYCA1;1 | Cell cycle.regulation.cyclins.CYCA-type cyclin | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01009399001 | CYCA3;1 | Cell cycle.regulation.cyclins.CYCA-type cyclin | 0.15 | OrthoFinder output from all 47 species | |
| GSVIVT01035718001 | CYC3B, CYCA2;2, CYC2BAT | Cell cycle.regulation.cyclins.CYCA-type cyclin | 0.09 | OrthoFinder output from all 47 species | |
| Gb_03779 | CYC3B, CYCA2;2, CYC2BAT | cyclin (CYCA) | 0.1 | OrthoFinder output from all 47 species | |
| Gb_07594 | CYC3B, CYCA2;2, CYC2BAT | cyclin (CYCA) | 0.1 | OrthoFinder output from all 47 species | |
| Gb_10619 | CYCA1;1 | cyclin (CYCA) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g13260.1 | CYCA1;1, LOC_Os01g13260 | cyclin (CYCA) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g41100.1 | CYCA3;1, LOC_Os03g41100 | cyclin (CYCA) | 0.15 | OrthoFinder output from all 47 species | |
| LOC_Os12g31810.1 | CYCA2;4, LOC_Os12g31810 | cyclin (CYCA) | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os12g39210.1 | CYCA3;4, LOC_Os12g39210 | cyclin (CYCA) | 0.07 | OrthoFinder output from all 47 species | |
| Len_g08312 | CYC3B, CYCA2;2, CYC2BAT | regulatory protein *(CYCA) of cell cycle & original... | 0.1 | OrthoFinder output from all 47 species | |
| Len_g21318 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.07 | OrthoFinder output from all 47 species | |
| Len_g32319 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g27348 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.09 | OrthoFinder output from all 47 species | |
| Lfl_g27435 | CYCA1;1 | regulatory protein *(CYCA) of cell cycle & original... | 0.08 | OrthoFinder output from all 47 species | |
| Lfl_g39997 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.14 | OrthoFinder output from all 47 species | |
| MA_103138g0010 | CYCA1;1 | cyclin (CYCA) | 0.06 | OrthoFinder output from all 47 species | |
| MA_28323g0010 | CYC3B, CYCA2;2, CYC2BAT | cyclin (CYCA) | 0.16 | OrthoFinder output from all 47 species | |
| MA_6619g0010 | CYCA1;1 | cyclin (CYCA) | 0.1 | OrthoFinder output from all 47 species | |
| MA_88982g0010 | CYC3B, CYCA2;2, CYC2BAT | cyclin (CYCA) | 0.15 | OrthoFinder output from all 47 species | |
| Mp2g25500.1 | CYCA1;1 | cyclin (CYCA) | 0.08 | OrthoFinder output from all 47 species | |
| Msp_g10135 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.13 | OrthoFinder output from all 47 species | |
| Msp_g12560 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.15 | OrthoFinder output from all 47 species | |
| Msp_g31552 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g06697 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.15 | OrthoFinder output from all 47 species | |
| Nbi_g16546 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g24493 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.18 | OrthoFinder output from all 47 species | |
| Ore_g35611 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g22509 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g05200 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g07555 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g31211 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.12 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0031.g010609 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g12488 | No alias | regulatory protein *(TAM) involved in metaphase to... | 0.11 | OrthoFinder output from all 47 species | |
| Sam_g12489 | No alias | regulatory protein *(TAM) involved in metaphase to... | 0.11 | OrthoFinder output from all 47 species | |
| Sam_g51377 | No alias | regulatory protein *(TAM) involved in metaphase to... | 0.07 | OrthoFinder output from all 47 species | |
| Smo442428 | CYCA1;1 | Cell cycle.regulation.cyclins.CYCA-type cyclin | 0.06 | OrthoFinder output from all 47 species | |
| Smo97411 | CYCA1;1 | Cell cycle.regulation.cyclins.CYCA-type cyclin | 0.05 | OrthoFinder output from all 47 species | |
| Solyc03g120440.3.1 | CYCA2;4, Solyc03g120440 | cyclin (CYCA) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g078310.3.1 | CYCA3;1, Solyc04g078310 | cyclin (CYCA) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g005090.2.1 | CYCA1;1, Solyc11g005090 | cyclin (CYCA) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc12g088470.3.1 | CYCA3;1, Solyc12g088470 | cyclin (CYCA) | 0.08 | OrthoFinder output from all 47 species | |
| Solyc12g088500.2.1 | CYCA3;1, Solyc12g088500 | cyclin (CYCA) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc12g088520.2.1 | CYCA3;1, Solyc12g088520 | cyclin (CYCA) | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g11240 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.16 | OrthoFinder output from all 47 species | |
| Spa_g11241 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.16 | OrthoFinder output from all 47 species | |
| Spa_g11267 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g30899 | CYCA1;1 | not classified & original description: none | 0.18 | OrthoFinder output from all 47 species | |
| Tin_g03369 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.22 | OrthoFinder output from all 47 species | |
| Tin_g30126 | CYCA1;1 | regulatory protein *(TAM) involved in metaphase to... | 0.19 | OrthoFinder output from all 47 species | |
| Zm00001e005138_P001 | CYCA3;1, Zm00001e005138 | cyclin (CYCA) | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e013250_P002 | CYC3B, CYCA2;2,... | cyclin (CYCA) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e017335_P001 | CYCA1;1, Zm00001e017335 | cyclin (CYCA) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e026125_P002 | CYCA1;1, Zm00001e026125 | cyclin (CYCA) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003682 | chromatin binding | IEP | HCCA |
| MF | GO:0004748 | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| CC | GO:0005694 | chromosome | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006275 | regulation of DNA replication | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | HCCA |
| MF | GO:0016728 | oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051052 | regulation of DNA metabolic process | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| MF | GO:0061731 | ribonucleoside-diphosphate reductase activity | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |