Description : not classified & original description: none
Gene families : OG0001265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001265_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT4G36960 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.02 | OrthoFinder output from all 47 species | |
Adi_g025859 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g08051 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene55747.t1 | Aspi01Gene55747 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g13479 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.01G051600.1 | Ceric.01G051600 | not classified & original description: pacid=50592490... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.25G014900.1 | Ceric.25G014900 | not classified & original description: pacid=50594354... | 0.01 | OrthoFinder output from all 47 species | |
Ceric.27G020300.1 | Ceric.27G020300 | not classified & original description: pacid=50605628... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.31G061400.1 | Ceric.31G061400 | not classified & original description: pacid=50575101... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.39G011900.1 | Ceric.39G011900 | not classified & original description: pacid=50583491... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g02839 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g04880 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g10033 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g27115 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01022126001 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Len_g09675 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Lfl_g05577 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g07743 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g16481 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g27184 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g090910.3.1 | Solyc02g090910 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g16749 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e018673_P002 | Zm00001e018673 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | HCCA |
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
BP | GO:0000381 | regulation of alternative mRNA splicing, via spliceosome | IEP | HCCA |
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
BP | GO:0002097 | tRNA wobble base modification | IEP | HCCA |
BP | GO:0002098 | tRNA wobble uridine modification | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006400 | tRNA modification | IEP | HCCA |
BP | GO:0006605 | protein targeting | IEP | HCCA |
BP | GO:0006612 | protein targeting to membrane | IEP | HCCA |
BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | HCCA |
BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | HCCA |
BP | GO:0006766 | vitamin metabolic process | IEP | HCCA |
BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | HCCA |
BP | GO:0006771 | riboflavin metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
MF | GO:0008703 | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity | IEP | HCCA |
BP | GO:0009110 | vitamin biosynthetic process | IEP | HCCA |
BP | GO:0009231 | riboflavin biosynthetic process | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
BP | GO:0034227 | tRNA thio-modification | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | HCCA |
BP | GO:0042726 | flavin-containing compound metabolic process | IEP | HCCA |
BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
BP | GO:0043484 | regulation of RNA splicing | IEP | HCCA |
BP | GO:0045047 | protein targeting to ER | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0048024 | regulation of mRNA splicing, via spliceosome | IEP | HCCA |
BP | GO:0050684 | regulation of mRNA processing | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
BP | GO:0051668 | localization within membrane | IEP | HCCA |
BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | HCCA |
BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1903311 | regulation of mRNA metabolic process | IEP | HCCA |
No external refs found! |