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  5. Dac_g12633

Dac_g12633 (PGP2)


Aliases : PGP2

Description : subfamily ABCB transporter & original description: none


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g12633

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00263610 ABCB19,... Solute transport.primary active transport.ABC... 0.07 OrthoFinder output from all 47 species
AMTR_s00017p00164980 ATPGP4, PGP4,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s00049p00128080 evm_27.TU.AmTr_v1... Putative multidrug resistance protein OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
AMTR_s00049p00128460 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00090p00165440 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AT1G02530 PGP12 P-glycoprotein 12 0.02 OrthoFinder output from all 47 species
AT1G10680 PGP10 P-glycoprotein 10 0.04 OrthoFinder output from all 47 species
AT2G36910 PGP1, ABCB1, ATPGP1 ATP binding cassette subfamily B1 0.03 OrthoFinder output from all 47 species
AT4G01820 PGP3, MDR3 P-glycoprotein 3 0.03 OrthoFinder output from all 47 species
Adi_g010407 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g021749 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24244 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07131 ABCB19,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14091 ATPGP4, PGP4, ABCB4, MDR4 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14092 PGP21 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14003 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20710.t1 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45620.t1 PGP11, Aspi01Gene45620 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45621.t1 PGP11, Aspi01Gene45621 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46795.t1 PGP2, Aspi01Gene46795 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010080 PGP2 subfamily ABCB transporter & original description: CDS=691-4485 0.03 OrthoFinder output from all 47 species
Azfi_s0039.g026389 PGP11 subfamily ABCB transporter & original description: CDS=323-4378 0.02 OrthoFinder output from all 47 species
Azfi_s0232.g059284 PGP13 subfamily ABCB transporter & original description: CDS=307-4314 0.07 OrthoFinder output from all 47 species
Azfi_s2496.g111845 ABCB19,... subfamily ABCB transporter & original description: CDS=142-3066 0.02 OrthoFinder output from all 47 species
Ceric.02G084300.1 ABCB19,... subfamily ABCB transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.06G076400.1 ABCB19,... subfamily ABCB transporter & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.34G053700.1 PGP2, Ceric.34G053700 subfamily ABCB transporter & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.35G032800.1 ABCB19,... subfamily ABCB transporter & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g06724 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g06939 PGP13 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14063 PGP11 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12428 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g30302 PGP2 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g30303 PGP2 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g46023 PGP13 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Gb_08702 No alias subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Gb_13908 PGP10 ABC transporter B family member 10 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Gb_32487 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os04g38570.1 ABCB19,... auxin efflux transporter (ABCB19) 0.04 OrthoFinder output from all 47 species
Len_g46613 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Len_g59882 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g21852 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
MA_10434957g0010 PGP1, ABCB1, ATPGP1 ABC transporter B family member 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_8240705g0010 PGP17 ABC transporter B family member 17 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Mp2g02910.1 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Mp2g11920.1 ABCB19,... subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Msp_g35589 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36979 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g02480 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03862 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24809 PGP2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g32846 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g37290 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35743 No alias subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g38310 PGP13 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04029 PGP11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03284 PGP13 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04001 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17867 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000035 PGP13 subfamily ABCB transporter & original description: CDS=555-4511 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017905 PGP11 not classified & original description: CDS=139-861 0.02 OrthoFinder output from all 47 species
Smo408755 No alias Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Smo74892 PGP11 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo92485 ABCB19,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Solyc06g009280.1.1 PGP11, Solyc06g009280 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Spa_g06203 PGP13 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05722 ABCB19,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e020770_P002 PGP11, Zm00001e020770 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Zm00001e023274_P001 PGP2, Zm00001e023274 subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Zm00001e041008_P003 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 686 958
IPR011527 ABC1_TM_dom 54 321
IPR003439 ABC_transporter-like_ATP-bd 1027 1174
IPR003439 ABC_transporter-like_ATP-bd 392 540
No external refs found!