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  5. Dac_g12578

Dac_g12578


Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g12578

Target Alias Description ECC score Gene Family Method Actions
Adi_g059695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02274 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g02586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07187 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15632 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06380 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58990 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30688 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010264 No alias not classified & original description: CDS=1-2337 0.03 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.02 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.02 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.02 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.02 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.02 OrthoFinder output from all 47 species
Cba_g19873 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20888 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67232 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G075500.1 Ceric.17G075500 not classified & original description: pacid=50617952... 0.03 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.02 OrthoFinder output from all 47 species
Dac_g31479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15176 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g30080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17403 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63884 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03887 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09500 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000390 No alias not classified & original description: CDS=1-1221 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003526 No alias not classified & original description: CDS=1-2562 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007662 CRR22 not classified & original description: CDS=517-2514 0.03 OrthoFinder output from all 47 species
Spa_g26579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06050 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g40520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g41079 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0016151 nickel cation binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 314 344
IPR002885 Pentatricopeptide_repeat 431 460
IPR002885 Pentatricopeptide_repeat 286 312
IPR002885 Pentatricopeptide_repeat 663 710
IPR002885 Pentatricopeptide_repeat 211 257
IPR002885 Pentatricopeptide_repeat 546 593
IPR002885 Pentatricopeptide_repeat 766 812
No external refs found!