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  5. Dac_g12533

Dac_g12533


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0001022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001022_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g12533

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01006776001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.02 OrthoFinder output from all 47 species
LOC_Os11g18730.1 LOC_Os11g18730 bifunctional alpha-L-arabinofuranosidase and... 0.03 OrthoFinder output from all 47 species
Pir_g18870 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Smo80102 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR026891 Fn3-like 724 790
IPR002772 Glyco_hydro_3_C 425 654
IPR001764 Glyco_hydro_3_N 81 382
No external refs found!