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  5. Dac_g12401

Dac_g12401


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g12401

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00095700 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g003400 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g51140.1 LOC_Os02g51140 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g15462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30139 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g21920.1 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 92.4) 0.02 OrthoFinder output from all 47 species
Pir_g33909 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e031085_P001 Zm00001e031085 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 113.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
CC GO:0072546 EMC complex IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 682 722
IPR006652 Kelch_1 540 585
IPR006652 Kelch_1 591 631
IPR006652 Kelch_1 635 678
IPR013989 Dev_and_cell_death_domain 40 169
No external refs found!