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  5. Dac_g11566

Dac_g11566 (LACS4)


Aliases : LACS4

Description : EC_6.2 ligase forming carbon-sulfur bond & original description: none


Gene families : OG0000612 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000612_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g11566

Target Alias Description ECC score Gene Family Method Actions
AT1G49430 LRD2, LACS2 long-chain acyl-CoA synthetase 2 0.04 OrthoFinder output from all 47 species
AT2G47245 No alias No description available 0.05 OrthoFinder output from all 47 species
Ala_g02292 ATLACS7, LACS7 EC_6.2 ligase forming carbon-sulfur bond & original... 0.07 OrthoFinder output from all 47 species
Ceric.24G023000.1 LACS4, Ceric.24G023000 EC_6.2 ligase forming carbon-sulfur bond & original... 0.05 OrthoFinder output from all 47 species
Dcu_g08877 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Dde_g01611 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.05 OrthoFinder output from all 47 species
Ehy_g08481 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
LOC_Os05g04170.1 CER8, LACS1,... Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g35400.1 LRD2, LACS2,... Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10432761g0010 LACS4 Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_839621g0010 No alias Long chain acyl-CoA synthetase 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g15713 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Ppi_g17117 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Sam_g15770 No alias EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Spa_g26451 LACS4 EC_6.2 ligase forming carbon-sulfur bond & original... 0.06 OrthoFinder output from all 47 species
Zm00001e020282_P001 LACS4, Zm00001e020282 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e024608_P001 LRD2, LACS2,... Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e036457_P004 LACS4, Zm00001e036457 Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004486 methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 116 585
No external refs found!