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  5. Dac_g11559

Dac_g11559


Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0000356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g11559

Target Alias Description ECC score Gene Family Method Actions
Adi_g004507 SAMDC EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056998 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11762 No alias ornithine decarboxylase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene10354.t1 Aspi01Gene10354 ornithine decarboxylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28446.t1 Aspi01Gene28446 EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g15212 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G041400.1 SAMDC, Ceric.34G041400 EC_4.1 carbon-carbon lyase & original description:... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000615.81 SAMDC Polyamine... 0.01 OrthoFinder output from all 47 species
GSVIVT01017856001 SAMDC4, BUD2 Polyamine... 0.04 OrthoFinder output from all 47 species
LOC_Os09g37120.1 LOC_Os09g37120 ornithine decarboxylase 0.04 OrthoFinder output from all 47 species
Len_g20881 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06604 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07578 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g080380.4.1 SAMDC4, BUD2,... S-adenosyl methionine decarboxylase 0.03 OrthoFinder output from all 47 species
Solyc04g082030.1.1 Solyc04g082030 ornithine decarboxylase 0.02 OrthoFinder output from all 47 species
Spa_g11563 No alias EC_4.1 carbon-carbon lyase & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g37126 SAMDC EC_4.1 carbon-carbon lyase & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e035959_P001 Zm00001e035959 ornithine decarboxylase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR001985 S-AdoMet_decarboxylase 20 346
IPR022644 De-COase2_N 441 674
IPR022643 De-COase2_C 675 776
No external refs found!