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  5. Dac_g11073

Dac_g11073


Description : not classified & original description: none


Gene families : OG0005520 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005520_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g11073

Target Alias Description ECC score Gene Family Method Actions
Aop_g14661 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0002.g001173 No alias not classified & original description: CDS=1-2220 0.03 OrthoFinder output from all 47 species
Ceric.25G040400.1 Ceric.25G040400 not classified & original description: pacid=50594395... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021012.34 No alias DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre07.g334200 No alias DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os02g05660.1 LOC_Os02g05660 DEAD-box ATP-dependent RNA helicase 35A OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Mp4g18960.1 No alias DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc06g068280.3.1 Solyc06g068280 DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000012 single strand break repair IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 433 540
IPR011545 DEAD/DEAH_box_helicase_dom 217 397
No external refs found!