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Aliases : BRCA1, ATBRCA1
Description : component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination heterodimer & original description: none
Gene families : OG0001776 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001776_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Dac_g10577 | |
| Cluster | HCCA: Cluster_18 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00067p00180030 | BRCA1, ATBRCA1,... | DNA damage response.BRCA1–BARD1 DNA-damage response... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00092p00067800 | BRCA1, ATBRCA1,... | DNA damage response.BRCA1–BARD1 DNA-damage response... | 0.08 | OrthoFinder output from all 47 species | |
| AT1G04020 | BARD1, ROW1, ATBARD1 | breast cancer associated RING 1 | 0.09 | OrthoFinder output from all 47 species | |
| AT4G21070 | BRCA1, ATBRCA1 | breast cancer susceptibility1 | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g22116 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g16524 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.09 | OrthoFinder output from all 47 species | |
| Aop_g08732 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.12 | OrthoFinder output from all 47 species | |
| Aop_g10443 | BARD1, ROW1, ATBARD1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.11 | OrthoFinder output from all 47 species | |
| Aspi01Gene06963.t1 | BRCA1, ATBRCA1,... | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.08 | OrthoFinder output from all 47 species | |
| Aspi01Gene29593.t1 | BRCA1, ATBRCA1,... | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene40923.t1 | BARD1, ROW1,... | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.16G078600.1 | BARD1, ROW1,... | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.19G066200.1 | BRCA1, ATBRCA1,... | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.30G011100.1 | BARD1, ROW1,... | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.06 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020537.14 | No alias | DNA damage response.BRCA1–BARD1 DNA-damage response... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g10242 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.11 | OrthoFinder output from all 47 species | |
| Gb_00493 | BRCA1, ATBRCA1 | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.12 | OrthoFinder output from all 47 species | |
| LOC_Os04g43300.1 | BARD1, ROW1,... | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os05g43610.1 | BRCA1, ATBRCA1,... | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.05 | OrthoFinder output from all 47 species | |
| Len_g11293 | BARD1, ROW1, ATBARD1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.03 | OrthoFinder output from all 47 species | |
| MA_12220g0020 | BRCA1, ATBRCA1 | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.07 | OrthoFinder output from all 47 species | |
| MA_187851g0010 | BRCA1, ATBRCA1 | Protein BREAST CANCER SUSCEPTIBILITY 1 homolog... | 0.09 | OrthoFinder output from all 47 species | |
| MA_66542g0010 | BRCA1, ATBRCA1 | Protein BREAST CANCER SUSCEPTIBILITY 1 homolog... | 0.07 | OrthoFinder output from all 47 species | |
| Mp1g00070.1 | BRCA1, ATBRCA1 | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.1 | OrthoFinder output from all 47 species | |
| Msp_g15829 | BARD1, ROW1, ATBARD1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.12 | OrthoFinder output from all 47 species | |
| Nbi_g12141 | BARD1, ROW1, ATBARD1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.09 | OrthoFinder output from all 47 species | |
| Nbi_g26771 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.12 | OrthoFinder output from all 47 species | |
| Ppi_g16822 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.07 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0019.g007705 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.06 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0022.g008687 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0092.g018874 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.06 | OrthoFinder output from all 47 species | |
| Smo414577 | BARD1, ROW1, ATBARD1 | Protein biosynthesis.translation... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g008210.4.1 | BARD1, ROW1,... | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.09 | OrthoFinder output from all 47 species | |
| Spa_g04261 | BARD1, ROW1, ATBARD1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquitination... | 0.13 | OrthoFinder output from all 47 species | |
| Tin_g32798 | BRCA1, ATBRCA1 | component *(BRCA1/BARD1) of BRCA1-BARD1 ubiquiTination... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e007590_P001 | BARD1, ROW1,... | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e032102_P001 | BRCA1, ATBRCA1,... | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003682 | chromatin binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| CC | GO:0005694 | chromosome | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006996 | organelle organization | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009263 | deoxyribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051276 | chromosome organization | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |