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  5. Dac_g09576

Dac_g09576


Description : methylation reader *(MBD5-6) & original description: none


Gene families : OG0000559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g09576

Target Alias Description ECC score Gene Family Method Actions
Adi_g008918 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g018652 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26984 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g18783 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g00835 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25548 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04554 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04569 No alias methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13428 ATMBD6, MBD6 methylation reader *(MBD5-6) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19179 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13225 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16545 No alias methylation reader *(MBD5-6) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16912 MBD05, MBD5, ATMBD5 methylation reader *(MBD5-6) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR001739 Methyl_CpG_DNA-bd 365 414
No external refs found!