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  5. Dac_g09377

Dac_g09377 (RGA2, GAI)


Aliases : RGA2, GAI

Description : transcription factor *(DELLA) & original description: none


Gene families : OG0001108 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g09377

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00207780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
AT1G14920 RGA2, GAI GRAS family transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT5G17490 RGL3 RGA-like protein 3 0.03 OrthoFinder output from all 47 species
GSVIVT01011710001 RGA, RGA1 RNA biosynthesis.transcriptional activation.GRAS... 0.06 OrthoFinder output from all 47 species
GSVIVT01030735001 RGL1, RGL RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
LOC_Os03g49990.1 RGA2, GAI, LOC_Os03g49990 DELLA-type gibberellin signal transducer. transcription... 0.02 OrthoFinder output from all 47 species
Len_g17482 RGA, RGA1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430831g0010 RGA2, GAI DELLA-type gibberellin signal transducer. transcription... 0.04 OrthoFinder output from all 47 species
MA_1417572g0010 RGA, RGA1 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Ore_g29064 SCR, SGR1 GRAS-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g29234 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017422 RGA2, GAI GRAS-type transcription factor & original description: CDS=1-1875 0.03 OrthoFinder output from all 47 species
Smo139506 RGA2, GAI RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
Solyc10g086370.1.1 RGA, RGA1, Solyc10g086370 DELLA-type gibberellin signal transducer. transcription... 0.02 OrthoFinder output from all 47 species
Spa_g13334 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 430 800
IPR021914 TF_DELLA_N 45 111
No external refs found!