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  5. Dac_g07545

Dac_g07545 (ATPUB45, PUB45)


Aliases : ATPUB45, PUB45

Description : E3 ubiquitin ligase & original description: none


Gene families : OG0002832 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002832_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g07545
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Adi_g079897 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04833 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27084 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72640.t1 ATPUB45, PUB45,... E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.08G047000.1 ATPUB45, PUB45,... E3 ubiquitin ligase & original description:... 0.04 OrthoFinder output from all 47 species
Ehy_g03968 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g41250.1 ATPUB45, PUB45,... U-box domain-containing protein 7 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Lfl_g04138 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10053 No alias E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g11019 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g06538 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g33424 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02310 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g16169 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30427 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e041111_P003 ATPUB45, PUB45,... U-box domain-containing protein 7 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR003613 Ubox_domain 301 371
IPR000225 Armadillo 579 617
No external refs found!