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  5. Dac_g07482

Dac_g07482


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g07482
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
AT1G16480 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G74600 No alias pentatricopeptide (PPR) repeat-containing protein 0.02 OrthoFinder output from all 47 species
AT4G20010 PTAC9, OSB2 plastid transcriptionally active 9 0.03 OrthoFinder output from all 47 species
AT5G03800 emb1899, EMB175, EMB166 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g033814 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21991 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g27648 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27276 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g05719 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30627 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54958 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g59996 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08304 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37111 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37336 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02865 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04255 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05682 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g07660 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09260 EMB2758 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g16820 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17427 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17428 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17441 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20429 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21628 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23971 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23980 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g28711 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33592 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02394.t1 Aspi01Gene02394 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08600.t1 Aspi01Gene08600 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene21022.t1 Aspi01Gene21022 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000731 No alias not classified & original description: CDS=1-3192 0.04 OrthoFinder output from all 47 species
Azfi_s0054.g033714 CRR22 not classified & original description: CDS=1-1803 0.04 OrthoFinder output from all 47 species
Azfi_s0175.g055975 No alias not classified & original description: CDS=1-4965 0.02 OrthoFinder output from all 47 species
Cba_g06542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G010900.1 Ceric.13G010900 not classified & original description: pacid=50636623... 0.03 OrthoFinder output from all 47 species
Ceric.13G015700.1 Ceric.13G015700 not classified & original description: pacid=50636078... 0.04 OrthoFinder output from all 47 species
Ceric.22G042200.1 Ceric.22G042200 not classified & original description: pacid=50614742... 0.04 OrthoFinder output from all 47 species
Dac_g05743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18761 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g20281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30058 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g30156 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30160 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g31126 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35068 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g36371 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02951 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g15385 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16394 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18082 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26321 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g26395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46821 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01028154001 No alias Pentatricopeptide repeat-containing protein At2g35030,... 0.03 OrthoFinder output from all 47 species
Len_g13067 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18053 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g23907 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g08720 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10692 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10694 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_187514g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Mp5g04990.1 PTAC9, OSB2 ssDNA-binding protein (OSB). TAC9 cofactor of... 0.03 OrthoFinder output from all 47 species
Msp_g03882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07709 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g16919 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g31910 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34529 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41389 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g45692 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05844 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05898 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27954 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02728 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02826 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03417 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04990 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08446 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g13595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g28575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g43020 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57955 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57998 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60422 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63500 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63608 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63612 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63764 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63860 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63903 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g64477 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g44278 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g44704 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g45382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013068 No alias not classified & original description: CDS=1-1464 0.04 OrthoFinder output from all 47 species
Sam_g35189 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g007430.1.1 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.04 OrthoFinder output from all 47 species
Spa_g01551 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g01746 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14979 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15737 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g23113 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23705 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g33733 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g39147 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45696 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56457 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003605_P001 DOT4, Zm00001e003605 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Zm00001e011467_P004 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.02 OrthoFinder output from all 47 species
Zm00001e015440_P001 CRR22, Zm00001e015440 Pentatricopeptide repeat-containing protein At3g57430,... 0.05 OrthoFinder output from all 47 species
Zm00001e020442_P001 Zm00001e020442 Pentatricopeptide repeat-containing protein At4g21300... 0.04 OrthoFinder output from all 47 species
Zm00001e041048_P001 OTP86, Zm00001e041048 RNA editing factor (OTP86) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
CC GO:0032299 ribonuclease H2 complex IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR046848 E_motif 880 928
IPR002885 Pentatricopeptide_repeat 264 312
IPR002885 Pentatricopeptide_repeat 661 709
IPR002885 Pentatricopeptide_repeat 463 491
IPR002885 Pentatricopeptide_repeat 837 861
IPR002885 Pentatricopeptide_repeat 564 593
IPR002885 Pentatricopeptide_repeat 535 556
IPR002885 Pentatricopeptide_repeat 431 454
IPR002885 Pentatricopeptide_repeat 138 164
IPR002885 Pentatricopeptide_repeat 167 187
IPR002885 Pentatricopeptide_repeat 737 760
IPR002885 Pentatricopeptide_repeat 765 794
No external refs found!