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  5. Dac_g07103

Dac_g07103 (ATCNGC20, CNGC20, CNBT1)


Aliases : ATCNGC20, CNGC20, CNBT1

Description : cyclic nucleotide-gated cation channel *(CNGC) & original description: none


Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g07103
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00210p00019190 CNGC5, ATCNGC5,... Solute transport.channels.VIC superfamily.cyclic... 0.02 OrthoFinder output from all 47 species
AT2G24610 ATCNGC14, CNGC14 cyclic nucleotide-gated channel 14 0.04 OrthoFinder output from all 47 species
AT2G46430 ATCNGC3, CNGC3, CNGC3.C cyclic nucleotide gated channel 3 0.04 OrthoFinder output from all 47 species
AT2G46440 CNGC11, ATCNGC11 cyclic nucleotide-gated channels 0.03 OrthoFinder output from all 47 species
AT2G46450 ATCNGC12, CNGC12 cyclic nucleotide-gated channel 12 0.03 OrthoFinder output from all 47 species
AT3G17700 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-binding transporter 1 0.05 OrthoFinder output from all 47 species
AT4G01010 ATCNGC13, CNGC13 cyclic nucleotide-gated channel 13 0.03 OrthoFinder output from all 47 species
Ala_g05813 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Ala_g24639 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g24844 ATCNGC20, CNGC20, CNBT1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g33029 DND1, ATCNGC2, CNGC2 cyclic nucleotide-gated cation channel *(CNGC) &... 0.05 OrthoFinder output from all 47 species
Als_g12676 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Als_g34084 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene15680.t1 CNGC15,... cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0301.g063721 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.05 OrthoFinder output from all 47 species
Ceric.23G068600.1 CNGC15,... cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Dcu_g26407 DND1, ATCNGC2, CNGC2 temperature sensor protein *(CNGC2) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01025208001 CNGC15, ATCNGC15 Solute transport.channels.VIC superfamily.cyclic... 0.04 OrthoFinder output from all 47 species
GSVIVT01029404001 ATCNGC20, CNGC20, CNBT1 Solute transport.channels.VIC superfamily.cyclic... 0.03 OrthoFinder output from all 47 species
LOC_Os02g54760.1 ATCNGC17,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
MA_11172g0010 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
Msp_g15424 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.06 OrthoFinder output from all 47 species
Pir_g44975 ATCNGC3, CNGC3, CNGC3.C not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g18670 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0191.g025297 DND1, ATCNGC2, CNGC2 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Smo266723 ATCNGC20, CNGC20, CNBT1 Solute transport.channels.VIC superfamily.cyclic... 0.02 OrthoFinder output from all 47 species
Solyc03g098210.4.1 ATCNGC20,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
Solyc03g116850.3.1 ATCNGC8, CNGC8,... cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species
Solyc05g050350.2.1 ATCNGC1, CNGC1,... cyclic nucleotide-gated cation channel (CNGC) 0.04 OrthoFinder output from all 47 species
Solyc05g050360.3.1 ATCNGC1, CNGC1,... cyclic nucleotide-gated cation channel (CNGC) 0.04 OrthoFinder output from all 47 species
Solyc05g050380.4.1 ATCNGC13,... cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
Solyc08g069140.4.1 ATCNGC14,... cyclic nucleotide-gated cation channel (CNGC) 0.04 OrthoFinder output from all 47 species
Solyc12g010010.2.1 CNGC5, ATCNGC5,... cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species
Tin_g03478 ATCNGC8, CNGC8 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Zm00001e012009_P001 DND1, ATCNGC2,... cyclic nucleotide-gated cation channel (CNGC).... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003714 transcription corepressor activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 106 428
No external refs found!