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  5. Dac_g05144

Dac_g05144 (ATXYN1, RXF12)


Aliases : ATXYN1, RXF12

Description : endo-beta-1,4-xylanase & original description: none


Gene families : OG0001478 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001478_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g05144

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g04300.1 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.02 OrthoFinder output from all 47 species
LOC_Os03g47010.1 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.02 OrthoFinder output from all 47 species
LOC_Os05g25560.1 LOC_Os05g25560 endo-beta-1,4-xylanase 0.02 OrthoFinder output from all 47 species
Mp6g05510.1 ATXYN1, RXF12 endo-beta-1,4-xylanase 0.03 OrthoFinder output from all 47 species
Smo420481 No alias No description available 0.03 OrthoFinder output from all 47 species
Zm00001e016992_P001 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.01 OrthoFinder output from all 47 species
Zm00001e038773_P006 Zm00001e038773 no description available(sp|q84wt5|xyn5l_arath : 388.0) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001000 GH10_dom 553 818
IPR003305 CenC_carb-bd 185 318
IPR003305 CenC_carb-bd 352 493
IPR003305 CenC_carb-bd 3 143
No external refs found!