Dac_g05009

Description : not classified & original description: none

Gene families : OG0000926 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000926_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dac_g05009

Target	Alias	Description	ECC score	Gene Family Method
AT1G70190	No alias	Ribosomal protein L7/L12, oligomerisation;Ribosomal...	0.03	OrthoFinder output from all 47 species
AT4G37660	No alias	Ribosomal protein L12/ ATP-dependent Clp protease...	0.04	OrthoFinder output from all 47 species
Aev_g01453	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g19876	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g01020	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Azfi_s0004.g008259	No alias	not classified & original description: CDS=1-588	0.03	OrthoFinder output from all 47 species
Azfi_s0022.g016065	No alias	not classified & original description: CDS=1-390	0.03	OrthoFinder output from all 47 species
Azfi_s0331.g065406	No alias	not classified & original description: CDS=1-612	0.03	OrthoFinder output from all 47 species
Cba_g11519	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.07G061500.1	Ceric.07G061500	not classified & original description: pacid=50626515...	0.03	OrthoFinder output from all 47 species
Ceric.34G065900.1	Ceric.34G065900	not classified & original description: pacid=50622739...	0.04	OrthoFinder output from all 47 species
Dac_g02148	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
MA_137800g0010	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.06	OrthoFinder output from all 47 species
Mp1g23110.1	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
Pir_g06189	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g00755	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g59718	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g25874	No alias	component *(bL12m) of large mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Sam_g25875	No alias	component *(bL12m) of large mitoribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Solyc02g031970.1.1	Solyc02g031970	component mtRPL7/L12 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
Spa_g09129	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g09130	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e026468_P001	Zm00001e026468	component mtRPL7/L12 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
Zm00001e032350_P001	Zm00001e032350	component mtRPL7/L12 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0031267	small GTPase binding	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
MF	GO:0051020	GTPase binding	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013823	Ribosomal_L7/L12_C	170	234
IPR008932	Ribosomal_L7/L12_oligo	103	151

External Links

No external refs found!

Dac_g05009

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation