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  5. Dac_g04547

Dac_g04547 (PBB2)


Aliases : PBB2

Description : beta-type-2 component *(PBB) of 26S proteasome & original description: none


Gene families : OG0004022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004022_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g04547

Target Alias Description ECC score Gene Family Method Actions
AT3G27430 PBB1 N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.02 OrthoFinder output from all 47 species
AT5G40580 PBB2 20S proteasome beta subunit PBB2 0.02 OrthoFinder output from all 47 species
Adi_g012435 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Aev_g27947 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aop_g04145 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000485 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Cba_g14020 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Ceric.35G055100.1 PBB1, Ceric.35G055100 beta-type-2 component *(PBB) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Cre10.g424400 PBB1 Protein degradation.26S proteasome.20S core... 0.07 OrthoFinder output from all 47 species
Dde_g05731 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
GSVIVT01000574001 PBB2 Protein degradation.26S proteasome.20S core... 0.02 OrthoFinder output from all 47 species
Gb_35125 PBB2 component beta type-2 of 26S proteasome 0.03 OrthoFinder output from all 47 species
LOC_Os05g09490.1 PBB1, LOC_Os05g09490 component beta type-2 of 26S proteasome 0.07 OrthoFinder output from all 47 species
Len_g01148 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
MA_10436996g0010 PBB2 component beta type-2 of 26S proteasome 0.04 OrthoFinder output from all 47 species
Mp1g03530.1 PBB2 component beta type-2 of 26S proteasome 0.09 OrthoFinder output from all 47 species
Msp_g07522 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Ore_g11104 PBB1 beta-type-2 component *(PBB) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Smo149251 PBB1 Protein degradation.26S proteasome.20S core... 0.04 OrthoFinder output from all 47 species
Solyc05g013820.4.1 PBB1, Solyc05g013820 component beta type-2 of 26S proteasome 0.05 OrthoFinder output from all 47 species
Spa_g16137 PBB1 beta-type-2 component *(PBB) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Spa_g16138 PBB1 beta-type-2 component *(PBB) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Tin_g06407 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Zm00001e029814_P002 PBB1, Zm00001e029814 component beta type-2 of 26S proteasome 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 34 214
No external refs found!