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  5. Dac_g03582

Dac_g03582


Description : component *(U2B) of U2 snRNP complex & original description: none


Gene families : OG0003415 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003415_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g03582

Target Alias Description ECC score Gene Family Method Actions
Adi_g052796 No alias component *(U2B) of U2 snRNP complex & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G039600.1 Ceric.03G039600 component *(U2B) of U2 snRNP complex & original... 0.04 OrthoFinder output from all 47 species
Mp5g12580.1 No alias component U1A of U1 small nuclear ribonucleoprotein... 0.03 OrthoFinder output from all 47 species
Ore_g04288 No alias component *(U2B) of U2 snRNP complex & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0135.g022362 No alias component *(U2B) of U2 snRNP complex & original... 0.03 OrthoFinder output from all 47 species
Solyc09g075200.4.1 U1A, Solyc09g075200 component U1A of U1 small nuclear ribonucleoprotein... 0.02 OrthoFinder output from all 47 species
Zm00001e038386_P002 U2B'', Zm00001e038386 protein factor U2B of U2 small nuclear ribonucleoprotein... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 160 219
IPR000504 RRM_dom 12 81
No external refs found!