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  5. Dac_g03515

Dac_g03515


Description : regulatory factor *(PRIN2) of plastid-encoded RNA polymerase activity & original description: none


Gene families : OG0008326 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008326_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g03515
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
Aob_g09227 No alias regulatory factor *(PRIN2) of plastid-encoded RNA... 0.03 OrthoFinder output from all 47 species
Ceric.16G036000.1 Ceric.16G036000 regulatory factor *(PRIN2) of plastid-encoded RNA... 0.02 OrthoFinder output from all 47 species
Mp2g05600.1 No alias component PRIN2 of plastid-encoded RNA polymerase 0.02 OrthoFinder output from all 47 species
Nbi_g38061 No alias regulatory factor *(PRIN2) of plastid-encoded RNA... 0.05 OrthoFinder output from all 47 species
Pir_g11027 No alias regulatory factor *(PRIN2) of plastid-encoded RNA... 0.03 OrthoFinder output from all 47 species
Ppi_g09394 No alias regulatory factor *(PRIN2) of plastid-encoded RNA... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g012000 No alias not classified & original description: CDS=272-829 0.04 OrthoFinder output from all 47 species
Sam_g35106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030091 protein repair IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!