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  5. Dac_g03179

Dac_g03179


Description : component *(WDR5/SWD3) of COMPASS histone trimethylation complex & original description: none


Gene families : OG0001739 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001739_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g03179

Target Alias Description ECC score Gene Family Method Actions
Pir_g02465 No alias component *(WDR5/SWD3) of COMPASS histone trimethylation... 0.03 OrthoFinder output from all 47 species
Ppi_g02830 No alias substrate adaptor *(DHU1) of CUL4-based ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Solyc02g091790.3.1 Solyc02g091790 component WDR5 of COMPASS histone trimethylation complex 0.02 OrthoFinder output from all 47 species
Zm00001e005534_P002 Zm00001e005534 component WDR5 of COMPASS histone trimethylation complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 14 51
IPR001680 WD40_repeat 224 265
IPR001680 WD40_repeat 139 177
IPR001680 WD40_repeat 57 93
IPR001680 WD40_repeat 270 308
IPR001680 WD40_repeat 97 135
IPR001680 WD40_repeat 182 220
No external refs found!