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  5. Dac_g02601

Dac_g02601 (PSB27)


Aliases : PSB27

Description : protein involved in PS-II assembly *(Psb27) & original description: none


Gene families : OG0006913 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006913_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g02601
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AT1G03600 PSB27 photosystem II family protein 0.07 OrthoFinder output from all 47 species
Adi_g017378 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.02 OrthoFinder output from all 47 species
Ala_g03684 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.04 OrthoFinder output from all 47 species
Aob_g03856 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.04 OrthoFinder output from all 47 species
Aop_g01610 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.08 OrthoFinder output from all 47 species
Azfi_s0531.g075849 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.05 OrthoFinder output from all 47 species
Ceric.35G049900.1 PSB27, Ceric.35G049900 protein involved in PS-II assembly *(Psb27) & original... 0.1 OrthoFinder output from all 47 species
Cre05.g243800 PSB27 Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
Dde_g21620 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g19278 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01030552001 PSB27 Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
Gb_23437 PSB27 Psb27 protein involved in PS-II assembly 0.03 OrthoFinder output from all 47 species
LOC_Os03g21560.1 PSB27, LOC_Os03g21560 Psb27 protein involved in PS-II assembly 0.05 OrthoFinder output from all 47 species
Len_g11187 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.05 OrthoFinder output from all 47 species
MA_388691g0010 PSB27 Psb27 protein involved in PS-II assembly 0.06 OrthoFinder output from all 47 species
Mp3g19780.1 PSB27 Psb27 protein involved in PS-II assembly 0.08 OrthoFinder output from all 47 species
Msp_g04977 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.09 OrthoFinder output from all 47 species
Nbi_g03338 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.08 OrthoFinder output from all 47 species
Pir_g09257 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.04 OrthoFinder output from all 47 species
Solyc07g054290.1.1 PSB27, Solyc07g054290 Psb27 protein involved in PS-II assembly 0.05 OrthoFinder output from all 47 species
Spa_g04006 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.05 OrthoFinder output from all 47 species
Spa_g04007 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.08 OrthoFinder output from all 47 species
Spa_g05331 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.1 OrthoFinder output from all 47 species
Spa_g05332 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.07 OrthoFinder output from all 47 species
Tin_g00234 PSB27 protein involved in PS-II assembly *(Psb27) & original... 0.07 OrthoFinder output from all 47 species
Zm00001e001572_P001 PSB27, Zm00001e001572 Psb27 protein involved in PS-II assembly 0.06 OrthoFinder output from all 47 species
Zm00001e038249_P001 PSB27, Zm00001e038249 Psb27 protein involved in PS-II assembly 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0010206 photosystem II repair IEA Interproscan
BP GO:0010207 photosystem II assembly IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025585 PSII_Pbs27 82 189
No external refs found!