Aliases : AtRABA1f, RABA1f
Description : A-class RAB GTPase & original description: none
Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Dac_g02569 | |
Cluster | HCCA: Cluster_121 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G09630 | ATRABA2A,... | RAB GTPase 11C | 0.02 | OrthoFinder output from all 47 species | |
Ceric.01G020800.1 | ATRABA5C, ARA4,... | A-class RAB GTPase & original description:... | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020961.97 | AtRABA1e, RABA1e | Vesicle trafficking.regulation of membrane tethering and... | 0.02 | OrthoFinder output from all 47 species | |
Dde_g01270 | RABA2b,... | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g15896 | ATRABA2A,... | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10430522g0010 | ATRABA2A,... | A-class RAB GTPase | 0.03 | OrthoFinder output from all 47 species | |
Solyc12g014080.2.1 | AtRABA1f,... | A-class RAB GTPase | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e003625_P001 | ATRABA5C, ARA4,... | A-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e027669_P001 | ATRABA2A,... | A-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e032148_P001 | ATRABA1B, RAB11,... | A-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003924 | GTPase activity | IEA | Interproscan |
MF | GO:0005525 | GTP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004097 | catechol oxidase activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005778 | peroxisomal membrane | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0007031 | peroxisome organization | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | HCCA |
MF | GO:0015297 | antiporter activity | IEP | HCCA |
CC | GO:0016020 | membrane | IEP | HCCA |
MF | GO:0016679 | oxidoreductase activity, acting on diphenols and related substances as donors | IEP | HCCA |
MF | GO:0016682 | oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
CC | GO:0031903 | microbody membrane | IEP | HCCA |
CC | GO:0042579 | microbody | IEP | HCCA |
MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001806 | Small_GTPase | 14 | 174 |
No external refs found! |