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  5. Dac_g01373

Dac_g01373


Description : scaffold component *(Sec13) of coat protein complex & original description: none


Gene families : OG0003929 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003929_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g01373
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Cre17.g715750 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 OrthoFinder output from all 47 species
LOC_Os03g61630.2 LOC_Os03g61630 scaffolding component Sec13 of coat protein complex 0.03 OrthoFinder output from all 47 species
MA_95078g0010 No alias scaffolding component Sec13 of coat protein complex 0.02 OrthoFinder output from all 47 species
Mp4g02570.1 No alias scaffolding component Sec13 of coat protein complex 0.03 OrthoFinder output from all 47 species
Solyc02g087300.1.1 Solyc02g087300 scaffolding component Sec13 of coat protein complex 0.03 OrthoFinder output from all 47 species
Spa_g55109 No alias scaffold component *(Sec13) of coat protein complex &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005741 mitochondrial outer membrane IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 213 246
IPR001680 WD40_repeat 54 92
IPR001680 WD40_repeat 148 197
IPR001680 WD40_repeat 11 41
No external refs found!