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  5. Dac_g00803

Dac_g00803 (PTAC5)


Aliases : PTAC5

Description : cofactor of plastid-encoded RNA polymerase *(TAC5) & original description: none


Gene families : OG0007664 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007664_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dac_g00803

Target Alias Description ECC score Gene Family Method Actions
Aev_g10228 PTAC5 cofactor of plastid-encoded RNA polymerase *(TAC5) &... 0.06 OrthoFinder output from all 47 species
Als_g62119 PTAC5 cofactor of plastid-encoded RNA polymerase *(TAC5) &... 0.03 OrthoFinder output from all 47 species
Aob_g11480 PTAC5 cofactor of plastid-encoded RNA polymerase *(TAC5) &... 0.02 OrthoFinder output from all 47 species
Aop_g30535 PTAC5 cofactor of plastid-encoded RNA polymerase *(TAC5) &... 0.08 OrthoFinder output from all 47 species
Azfi_s1467.g103476 PTAC5 cofactor of plastid-encoded RNA polymerase *(TAC5) &... 0.03 OrthoFinder output from all 47 species
Cba_g07919 PTAC5 cofactor of plastid-encoded RNA polymerase *(TAC5) &... 0.09 OrthoFinder output from all 47 species
Dcu_g12562 PTAC5 cofactor of plastid-encoded RNA polymerase *(TAC5) &... 0.06 OrthoFinder output from all 47 species
Dde_g24577 PTAC5 cofactor of plastid-encoded RNA polymerase *(TAC5) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01029077001 PTAC5 RNA biosynthesis.organelle machineries.RNA polymerase... 0.03 OrthoFinder output from all 47 species
LOC_Os04g43420.1 PTAC5, LOC_Os04g43420 TAC5 cofactor of plastid-encoded RNA polymerase 0.03 OrthoFinder output from all 47 species
Len_g04276 PTAC5 cofactor of plastid-encoded RNA polymerase *(TAC5) &... 0.04 OrthoFinder output from all 47 species
Lfl_g15814 PTAC5 cofactor of plastid-encoded RNA polymerase *(TAC5) &... 0.04 OrthoFinder output from all 47 species
MA_692g0010 PTAC5 TAC5 cofactor of plastid-encoded RNA polymerase 0.05 OrthoFinder output from all 47 species
Nbi_g38958 PTAC5 cofactor of plastid-encoded RNA polymerase *(TAC5) &... 0.04 OrthoFinder output from all 47 species
Pp3c19_7640V3.1 PTAC5, Pp3c19_7640 plastid transcriptionally active 5 0.02 OrthoFinder output from all 47 species
Sam_g06443 No alias cofactor of plastid-encoded RNA polymerase *(TAC5) &... 0.03 OrthoFinder output from all 47 species
Smo404832 PTAC5 RNA biosynthesis.organelle machineries.RNA polymerase... 0.04 OrthoFinder output from all 47 species
Spa_g18327 PTAC5 cofactor of plastid-encoded RNA polymerase *(TAC5) &... 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003951 NAD+ kinase activity IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006741 NADP biosynthetic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002477 Peptidoglycan-bd-like 246 300
No external refs found!